3ZGV	Hydrolase	date	Dec 19, 2012
title	Structure Of Human Sirt2 In Complex With Adp-Ribose
authors	S.Moniot, C.Steegborn
compound		source
Molecule: Nad-Dependent Protein Deacetylase Sirtuin-2 Chain: A, B Fragment: Residues 34-356 Synonym: Sirtuin 2, Isoform 1, Regulatory Protein Sir2 Homo Sir2-Like Protein 2; Ec: 3.5.1.- Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pgex-4t3
symmetry	Space Group: P 21 21 21	R_factor 0.150 R_Free 0.188
crystal cell	length a length b length c angle alpha angle beta angle gamma 77.860 77.980 114.330 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.27 Å
ligand	ACT, AR6, GOL, PGE, ZN	enzyme	Hydrolase E.C.3.5.1 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	Crystal structure analysis of human Sirt2 and its ADP-ribose complex., Moniot S, Schutkowski M, Steegborn C, J Struct Biol. 2013 Feb 26. pii: S1047-8477(13)00049-X. doi:, 10.1016/j.jsb.2013.02.012. PMID:23454361

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (296 Kb) [Save to disk] Biological Unit Coordinates (3zgv.pdb1.gz) 288 Kb LPC: Ligand-Protein Contacts for 3ZGV CSU: Contacts of Structural Units for 3ZGV Structure Factors (389 Kb) Retrieve 3ZGV in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3ZGV from S2C, [Save to disk] Re-refined 3zgv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3ZGV in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3ZGV

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3ZGV, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3zgv_A] [3zgv_B] [3zgv] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3ZGV

Community annotation for 3ZGV at PDBWiki (http://pdbwiki.org)

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---