3ZXD date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CL, GOL, MES, MG, NA, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, C, D, A
  • toxin activity


  • Primary referenceStructures of lysenin reveal a shared evolutionary origin for pore-forming proteins and its mode of sphingomyelin recognition., De Colibus L, Sonnen AF, Morris KJ, Siebert CA, Abrusci P, Plitzko J, Hodnik V, Leippe M, Volpi E, Anderluh G, Gilbert RJ, Structure. 2012 Sep 5;20(9):1498-507. Epub 2012 Jul 19. PMID:22819216
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (401 Kb) [Save to disk]
  • Biological Unit Coordinates (3zxd.pdb1.gz) 101 Kb
  • Biological Unit Coordinates (3zxd.pdb2.gz) 102 Kb
  • Biological Unit Coordinates (3zxd.pdb3.gz) 100 Kb
  • Biological Unit Coordinates (3zxd.pdb4.gz) 101 Kb
  • LPC: Ligand-Protein Contacts for 3ZXD
  • CSU: Contacts of Structural Units for 3ZXD
  • Structure Factors (238 Kb)
  • Retrieve 3ZXD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3ZXD from S2C, [Save to disk]
  • Re-refined 3zxd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3ZXD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3zxd] [3zxd_A] [3zxd_B] [3zxd_C] [3zxd_D]
  • SWISS-PROT database:

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