3ZZW Transferase date Sep 05, 2011
title Crystal Structure Of The Kinase Domain Of Ror2
authors L.Tresaugues, M.Moche, C.H.Arrowsmith, H.Berglund, C.Bountra, A.M T.Ekblad, S.Graslund, T.Karlberg, T.Nyman, H.Schuler, A.G.Thorse J.Weigelt, P.Nordlund, Structural Genomics Consortium (Sgc)
compound source
Molecule: Tyrosine-Protein Kinase Transmembrane Receptor Ro
Chain: A, B
Fragment: Kinase Domain, Residues 463-751
Ec: 2.7.10.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
Expression_system_vector_type: Baculovirus
Expression_system_plasmid: Pfboh-Mhl
Other_details: Mammalian Gene Collection, Open Biosystems (
symmetry Space Group: P 1 21 1
R_factor 0.1874 R_Free 0.2473
crystal
cell
length a length b length c angle alpha angle beta angle gamma
55.613 61.301 79.936 90.00 93.07 90.00
method X-Ray Diffractionresolution 2.90 Å
ligand CL, SO4 enzyme Transferase E.C.2.7.10.1 BRENDA
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (186 Kb) [Save to disk]
  • Biological Unit Coordinates (3zzw.pdb1.gz) 180 Kb
  • LPC: Ligand-Protein Contacts for 3ZZW
  • CSU: Contacts of Structural Units for 3ZZW
  • Structure Factors (88 Kb)
  • Retrieve 3ZZW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3ZZW from S2C, [Save to disk]
  • Re-refined 3zzw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3ZZW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3ZZW
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3ZZW, from MSDmotif at EBI
  • Fold representative 3zzw from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3zzw] [3zzw_B] [3zzw_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3ZZW: [TyrKc ] by SMART
  • Other resources with information on 3ZZW
  • Community annotation for 3ZZW at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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