3P0G Structure of a nanobody-stabilized active state of the beta2 adrenoceptor date
authors Rasmussen, S.G.F., Choi, H.J., Fung, J.J., Pardon, E., Casarosa, P., Chae, P.S., DeVree, B.T., Rosenbaum, D.M., Thian, F.S., Kobilka, T.S., Schnapp, A., Konetzki, I., Sunahara, R.K., Gellman, S.H., Pautsch, A., Steyaert, J., Weis, W.I., Kobilka, B.K.
compound source
symmetry
R_factor
R_Free 0.3083
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.50
ligand P0G enzyme
note 3P0G (Molecule of the Month:pdb136)
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure of a nanobody-stabilized active state of the beta(2) adrenoceptor., Rasmussen SG, Choi HJ, Fung JJ, Pardon E, Casarosa P, Chae PS, Devree BT, Rosenbaum DM, Thian FS, Kobilka TS, Schnapp A, Konetzki I, Sunahara RK, Gellman SH, Pautsch A, Steyaert J, Weis WI, Kobilka BK, Nature. 2011 Jan 13;469(7329):175-80. PMID:21228869
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (73 Kb) [Save to disk]
  • Biological Unit Coordinates (3p0g.pdb1.gz) 67 Kb
  • LPC: Ligand-Protein Contacts for 3P0G
  • CSU: Contacts of Structural Units for 3P0G
  • Structure Factors (147 Kb)
  • Retrieve 3P0G in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3P0G from S2C, [Save to disk]
  • Re-refined 3p0g structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3P0G in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3P0G
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3P0G, from MSDmotif at EBI
  • Fold representative 3p0g from FSSP and Dali (Families of Structurally Similar Proteins)
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3p0g_A] [3p0g_B] [3p0g]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3P0G: [IGv ] by SMART
    • Other resources with information on 3P0G
  • Community annotation for 3P0G at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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