3U11 Tetramerization dynamics of the C-terminus underlies isoform-specific cAMP-gating in HCN channels date
authors Lolicato, M., Nardini, M., Gazzarrini, S., Moller, S., Bertinetti, D., Herberg, F.W., Bolognesi, M., Martin, H., Fasolini, M., Bertrand, J.A., Arrigoni, C., Thiel, G., Moroni, A.
compound source
symmetry
R_factor
R_Free 0.27737
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.50
ligand CMP, CSO, GOL enzyme
Primary referenceTetramerization dynamics of the C-terminal domain underlies isoform-specific cAMP-gating in Hyperpolarization-activated Cyclic Nucleotide gated channels., Lolicato M, Nardini M, Gazzarrini S, Moeller S, Bertinetti D, Herberg FW, Bolognesi M, Martin H, Fasolini M, Bertrand JA, Arrigoni C, Thiel G, Moroni A, J Biol Chem. 2011 Oct 17. PMID:22006928
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (77 Kb) [Save to disk]
  • Biological Unit Coordinates (3u11.pdb1.gz) 142 Kb
  • Biological Unit Coordinates (3u11.pdb2.gz) 143 Kb
  • LPC: Ligand-Protein Contacts for 3U11
  • CSU: Contacts of Structural Units for 3U11
  • Structure Factors (237 Kb)
  • Retrieve 3U11 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3U11 from S2C, [Save to disk]
  • Re-refined 3u11 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3U11 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3U11
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3U11, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3u11] [3u11_A] [3u11_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3U11: [cNMP ] by SMART
  • Other resources with information on 3U11
  • Community annotation for 3U11 at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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