4AML CRYSTAL STRUCTURE OF WHEAT GERM AGGLUTININ ISOLECTIN 1 IN COMPLEX WITH GLYCOSYLURETHAN date
authors Schwefel, D., Maierhofer, C., Beck, J.G., Seeberger, S., Diederichs, K., Moeller, H.M., Welte, W., Wittmann, V.
compound source
symmetry
R_factor
R_Free 0.23194
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.60
ligand GOL, GYU, PCA enzyme
note 4AML supersedes 2UWG
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructural Basis of Multivalent Binding to Wheat Germ Agglutinin., Schwefel D, Maierhofer C, Beck JG, Seeberger S, Diederichs K, Moller HM, Welte W, Wittmann V, J Am Chem Soc. 2010 Jun 7. PMID:20527753
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (111 Kb) [Save to disk]
  • Biological Unit Coordinates (4aml.pdb1.gz) 102 Kb
  • LPC: Ligand-Protein Contacts for 4AML
  • CSU: Contacts of Structural Units for 4AML
  • Structure Factors (279 Kb)
  • Retrieve 4AML in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4AML from S2C, [Save to disk]
  • Re-refined 4aml structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4AML in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4AML
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4AML, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4aml_B] [4aml] [4aml_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4AML: [ChtBD1 ] by SMART
    • Other resources with information on 4AML
  • Community annotation for 4AML at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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