4BGD		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	ADP, MG, PE5	enzyme
Gene Ontology	Chain Function Process Component A C
Primary reference	Structural Basis of Brr2-Prp8 Interactions and Implications for U5 snRNP Biogenesis and the Spliceosome Active Site., Nguyen TH, Li J, Galej WP, Oshikane H, Newman AJ, Nagai K, Structure. 2013 May 29. pii: S0969-2126(13)00129-9. doi:, 10.1016/j.str.2013.04.017. PMID:23727230

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (323 Kb) [Save to disk] Biological Unit Coordinates (4bgd.pdb1.gz) 317 Kb LPC: Ligand-Protein Contacts for 4BGD CSU: Contacts of Structural Units for 4BGD Structure Factors (976 Kb) Retrieve 4BGD in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4BGD from S2C, [Save to disk] Re-refined 4bgd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4BGD in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4bgd] [4bgd_A] [4bgd_C] SWISS-PROT database: Domains found in 4BGD: [AAA] [DEXDc] [HELICc] [JAB_MPN] [Sec63 ] by SMART

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---