4BZY Crystal structure of human glycogen branching enzyme (GBE1) date
authors Froese, D.S., Krojer, T., Goubin, S., Strain-Damerell, C., Mahajan, P., Delft, F.von., Burgess-Brown, N., Bountra, C., Arrowsmith, C.H., Edwards, A., Yue, W.W.
compound source
symmetry
R_factor
R_Free 0.2251
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.75
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Primary referenceStructural basis of glycogen branching enzyme deficiency and pharmacologic rescue by rational peptide design., Froese DS, Michaeli A, McCorvie TJ, Krojer T, Sasi M, Melaev E, Goldblum A, Zatsepin M, Lossos A, Alvarez R, Escriba PV, Minaissan BA, von Delft F, Kakhlon O, Yue WW, Hum Mol Genet. 2015 Jul 21. pii: ddv280. PMID:26199317
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (324 Kb) [Save to disk]
  • Biological Unit Coordinates (4bzy.pdb1.gz) 107 Kb
  • Biological Unit Coordinates (4bzy.pdb2.gz) 113 Kb
  • Biological Unit Coordinates (4bzy.pdb3.gz) 107 Kb
  • CSU: Contacts of Structural Units for 4BZY
  • Structure Factors (884 Kb)
  • Retrieve 4BZY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4BZY from S2C, [Save to disk]
  • Re-refined 4bzy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4BZY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4BZY
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4BZY, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4bzy_A] [4bzy] [4bzy_C] [4bzy_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4BZY: [Aamy ] by SMART
    • Other resources with information on 4BZY
  • Community annotation for 4BZY at PDBWiki (http://pdbwiki.org)

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