4C53 Crystal Structure of Guanarito virus GP2 in the post-fusion conformation date
authors Parsy, M., Huiskonen, J.T., Harlos, K., Bowden, T.A.
compound source
symmetry
R_factor
R_Free 0.2758
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 4.14
ligand BMA, MAN, NAG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Primary referenceCrystal structure of Venezuelan hemorrhagic fever virus fusion glycoprotein reveals a class 1 post-fusion architecture with extensive glycosylation., Parsy ML, Harlos K, Huiskonen JT, Bowden TA, J Virol. 2013 Sep 18. PMID:24049182
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (69 Kb) [Save to disk]
  • Biological Unit Coordinates (4c53.pdb1.gz) 61 Kb
  • LPC: Ligand-Protein Contacts for 4C53
  • CSU: Contacts of Structural Units for 4C53
  • Structure Factors (87 Kb)
  • Retrieve 4C53 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4C53 from S2C, [Save to disk]
  • Re-refined 4c53 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4C53 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4C53
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4C53, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4c53_A] [4c53] [4c53_C] [4c53_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4C53
  • Community annotation for 4C53 at PDBWiki (http://pdbwiki.org)

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