4CJM Signaling Protein date Dec 21, 2013
title Crystal Structure Of Human Fgf18
authors A.Brown, L.E.Adam, T.L.Blundell
compound source
Molecule: Fibroblast Growth Factor 18
Chain: A, B, C, D
Fragment: Residues 50-190
Synonym: Fgf-18, Zfgf5
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_variant: Rosetta-Gami2
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pbat4
symmetry Space Group: P 1 21 1
R_factor 0.212 R_Free 0.251
crystal
cell
length a length b length c angle alpha angle beta angle gamma
65.760 49.496 100.854 90.00 101.74 90.00
method X-Ray Diffractionresolution 2.70 Å
ligand SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceThe crystal structure of fibroblast growth factor 18 (FGF18)., Brown A, Adam LE, Blundell TL, Protein Cell. 2014 Mar 26. PMID:24668462
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (181 Kb) [Save to disk]
  • Biological Unit Coordinates (4cjm.pdb1.gz) 45 Kb
  • Biological Unit Coordinates (4cjm.pdb2.gz) 45 Kb
  • Biological Unit Coordinates (4cjm.pdb3.gz) 45 Kb
  • Biological Unit Coordinates (4cjm.pdb4.gz) 46 Kb
  • LPC: Ligand-Protein Contacts for 4CJM
  • CSU: Contacts of Structural Units for 4CJM
  • Structure Factors (440 Kb)
  • Retrieve 4CJM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4CJM from S2C, [Save to disk]
  • Re-refined 4cjm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4CJM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4CJM
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 4CJM, from MSDmotif at EBI
  • Fold representative 4cjm from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4cjm_B] [4cjm_A] [4cjm_C] [4cjm] [4cjm_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4CJM: [FGF ] by SMART
  • Other resources with information on 4CJM
  • Community annotation for 4CJM at PDBWiki (http://pdbwiki.org)

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