OCA Atlas for 4CMY

4CMY

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

enzyme

Gene
Ontology

Chain	Function	Process	Component
B, I, S, D, O, R, T, U, X, H, F, G, J, A, V, N, P, M, C, L, Q, K, W, E

Primary reference

The crystal structure of ferritin from Chlorobium tepidum reveals a new conformation of the 4-fold channel for this protein family., Arenas-Salinas M, Townsend PD, Brito C, Marquez V, Marabolli V, Gonzalez-Nilo F, Matias C, Watt RK, Lopez-Castro JD, Dominguez-Vera J, Pohl E, Yevenes A, Biochimie. 2014 Nov;106:39-47. doi: 10.1016/j.biochi.2014.07.019. Epub 2014 Jul, 28. PMID:25079050

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (652 Kb) [Save to disk]

Biological Unit Coordinates (4cmy.pdb1.gz) 639 Kb

LPC: Ligand-Protein Contacts for 4CMY

CSU: Contacts of Structural Units for 4CMY

Structure Factors (3399 Kb)

Retrieve 4CMY in mmCIF format [Save to disk]

Re-refined 4cmy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4CMY in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4cmy_X] [4cmy] [4cmy_N] [4cmy_A] [4cmy_M] [4cmy_B] [4cmy_O] [4cmy_C] [4cmy_P] [4cmy_D] [4cmy_Q] [4cmy_E] [4cmy_R] [4cmy_F] [4cmy_S] [4cmy_G] [4cmy_T] [4cmy_H] [4cmy_U] [4cmy_I] [4cmy_V] [4cmy_J] [4cmy_W] [4cmy_K] [4cmy_L]

SWISS-PROT database:

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