4CXH Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement date
authors Budkevich, T.V., Giesebrecht, J., Behrmann, E., Loerke, J., Ramrath, D.J.F., Mielke, T., Ismer, J., Hildebrand, P., Tung, C.S., Nierhaus, K.H., Sanbonmatsu, K.Y., Spahn, C.M.T.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 8.90
ligand 1MA, 2MG, 5MC, 5MU, 7MG, H2U, M2G, MIA, OMC, PHE, PSU enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


X

  • cytosolic small ribosomal su...
    • Primary referenceRegulation of the Mammalian elongation cycle by subunit rolling: a eukaryotic-specific ribosome rearrangement., Budkevich TV, Giesebrecht J, Behrmann E, Loerke J, Ramrath DJ, Mielke T, Ismer J, Hildebrand PW, Tung CS, Nierhaus KH, Sanbonmatsu KY, Spahn CM, Cell. 2014 Jul 3;158(1):121-31. doi: 10.1016/j.cell.2014.04.044. PMID:24995983
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (234 Kb) [Save to disk]
  • Biological Unit Coordinates (4cxh.pdb1.gz) 227 Kb
  • LPC: Ligand-Protein Contacts for 4CXH
  • CSU: Contacts of Structural Units for 4CXH
  • Retrieve 4CXH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4CXH from S2C, [Save to disk]
    • View 4CXH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4CXH
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4CXH, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4cxh_1] [4cxh_Y] [4cxh_c] [4cxh_2] [4cxh_X] [4cxh_A] [4cxh] [4cxh_a] [4cxh_x] [4cxh_b]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4CXH
  • Community annotation for 4CXH at PDBWiki (http://pdbwiki.org)

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