4D5E		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	1PG, 2PE, CL, FAD, MES, MG, P6G, PEG, PG4, TPP	enzyme
Gene Ontology	Chain Function Process Component B, A
Primary reference	Extended reaction scope of thiamine diphosphate dependent cyclohexane-1,2-dione hydrolase: from C-C bond cleavage to C-C bond ligation., Loschonsky S, Wacker T, Waltzer S, Giovannini PP, McLeish MJ, Andrade SL, Muller M, Angew Chem Int Ed Engl. 2014 Dec 22;53(52):14402-6. doi: 10.1002/anie.201408287. , Epub 2014 Nov 7. PMID:25382418

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (220 Kb) [Save to disk] Biological Unit Coordinates (4d5e.pdb1.gz) 412 Kb LPC: Ligand-Protein Contacts for 4D5E CSU: Contacts of Structural Units for 4D5E Structure Factors (3750 Kb) Retrieve 4D5E in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4D5E from S2C, [Save to disk] Re-refined 4d5e structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4D5E in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4d5e] [4d5e_A] [4d5e_B] SWISS-PROT database:

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