OCA Atlas for 4D7R

4D7R

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

Gene
Ontology

Chain	Function	Process	Component
A

Primary reference

On the use of Legionella/Rickettsia chimeras to investigate the structure and regulation of Rickettsia effector RalF., Folly-Klan M, Sancerne B, Alix E, Roy CR, Cherfils J, Campanacci V, J Struct Biol. 2014 Dec 9. pii: S1047-8477(14)00264-0. doi:, 10.1016/j.jsb.2014.12.001. PMID:25498244

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (130 Kb) [Save to disk]

Biological Unit Coordinates (4d7r.pdb1.gz) 124 Kb

CSU: Contacts of Structural Units for 4D7R

Structure Factors (518 Kb)

Retrieve 4D7R in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 4D7R from S2C, [Save to disk]

Re-refined 4d7r structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4D7R in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4d7r] [4d7r_A]

SWISS-PROT database:

Domain found in 4D7R: [Sec7 ] by SMART

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