4D8C date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand BXD, SO4 BindingDB enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A, C


Primary referenceDiscovery of cyclic sulfone hydroxyethylamines as potent and selective beta-site APP-cleaving enzyme 1 (BACE1) inhibitors: structure-based design and in vivo reduction of amyloid beta-peptides., Rueeger H, Lueoend R, Rogel O, Rondeau JM, Mobitz H, Machauer R, Jacobson L, Staufenbiel M, Desrayaud S, Neumann U, J Med Chem. 2012 Apr 12;55(7):3364-86. Epub 2012 Mar 21. PMID:22380629
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (204 Kb) [Save to disk]
  • Biological Unit Coordinates (4d8c.pdb1.gz) 70 Kb
  • Biological Unit Coordinates (4d8c.pdb2.gz) 69 Kb
  • Biological Unit Coordinates (4d8c.pdb3.gz) 70 Kb
  • LPC: Ligand-Protein Contacts for 4D8C
  • CSU: Contacts of Structural Units for 4D8C
  • Structure Factors (850 Kb)
  • Retrieve 4D8C in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4D8C from S2C, [Save to disk]
  • Re-refined 4d8c structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4D8C in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4d8c] [4d8c_A] [4d8c_B] [4d8c_C]
  • SWISS-PROT database:

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