4DI6		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
Gene	BB
Gene Ontology	Chain Function Process Component E, B, C, F, A, D
Primary reference	Structure and analysis of nucleoside diphosphate kinase from Borrelia burgdorferi prepared in a transition-state complex with ADP and vanadate moieties., Dumais M, Davies DR, Lin T, Staker BL, Myler PJ, Van Voorhis WC, Acta Crystallogr F Struct Biol Commun. 2018 Jun 1;74(Pt 6):373-384. doi:, 10.1107/S2053230X18007392. Epub 2018 May 31. PMID:29870023

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (338 Kb) [Save to disk] Biological Unit Coordinates (4di6.pdb1.gz) 328 Kb CSU: Contacts of Structural Units for 4DI6 Structure Factors (758 Kb) Retrieve 4DI6 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4DI6 from S2C, [Save to disk] Re-refined 4di6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4DI6 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4di6] [4di6_A] [4di6_B] [4di6_C] [4di6_D] [4di6_E] [4di6_F] SWISS-PROT database: Domain found in 4DI6: [NDK ] by SMART

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---