4F07 Structure of the Styrene Monooxygenase Flavin Reductase (SMOB) from Pseudomonas putida S12 date 2012-05-03
authors Sazinsky, M.H., Morrison, E., Kantz, A., Gassner, G.
compound source
symmetry
R_factor
R_Free 0.248
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.30
ligand FAD, NO3, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
F, A, J, K, E, B, H, C, D, I, G, L
  • monooxygenase activity


    • Primary referenceStructure and Mechanism of Styrene Monooxygenase Reductase: New Insight into the FAD-Transfer Reaction., Morrison E, Kantz A, Gassner GT, Sazinsky MH, Biochemistry. 2013 Sep 3;52(35):6063-75. doi: 10.1021/bi400763h. Epub 2013 Aug, 20. PMID:23909369
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (310 Kb) [Save to disk]
  • Biological Unit Coordinates (4f07.pdb1.gz) 55 Kb
  • Biological Unit Coordinates (4f07.pdb2.gz) 56 Kb
  • Biological Unit Coordinates (4f07.pdb3.gz) 54 Kb
  • Biological Unit Coordinates (4f07.pdb4.gz) 55 Kb
  • Biological Unit Coordinates (4f07.pdb5.gz) 55 Kb
  • Biological Unit Coordinates (4f07.pdb6.gz) 55 Kb
  • LPC: Ligand-Protein Contacts for 4F07
  • CSU: Contacts of Structural Units for 4F07
  • Structure Factors (1230 Kb)
  • Retrieve 4F07 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4F07 from S2C, [Save to disk]
  • Re-refined 4f07 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4F07 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4F07
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4F07, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4f07_I] [4f07] [4f07_B] [4f07_C] [4f07_J] [4f07_A] [4f07_F] [4f07_L] [4f07_H] [4f07_D] [4f07_E] [4f07_G] [4f07_K]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4F07: [Flavin_Reduct ] by SMART
    • Other resources with information on 4F07
  • Community annotation for 4F07 at PDBWiki (http://pdbwiki.org)

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