4GJH	Crystal Structure of the TRAF domain of TRAF5	date	2012-08-09
authors	Zhang, P., Reichardt, A., Liang, H., Wang, Y., Cheng, D., Aliyari, R., Cheng, G., Liu, Y.
compound		source
symmetry		R_factor R_Free 0.2731
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	2.81
Gene Ontology	Chain Function Process Component A, C, B
Primary reference	Single Amino Acid Substitutions Confer the Antiviral Activity of the TRAF3 Adaptor Protein onto TRAF5., Zhang P, Reichardt A, Liang H, Aliyari R, Cheng D, Wang Y, Xu F, Cheng G, Liu Y, Sci Signal. 2012 Nov 13;5(250):ra81. doi: 10.1126/scisignal.2003152. PMID:23150880

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (89 Kb) [Save to disk] Biological Unit Coordinates (4gjh.pdb1.gz) 85 Kb CSU: Contacts of Structural Units for 4GJH Structure Factors (136 Kb) Retrieve 4GJH in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4GJH from S2C, [Save to disk] Re-refined 4gjh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4GJH in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4GJH

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4GJH, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4gjh_B] [4gjh_C] [4gjh_A] [4gjh] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 4GJH: [MATH ] by SMART

Other resources with information on 4GJH

Community annotation for 4GJH at PDBWiki (http://pdbwiki.org)

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