4GMV Crystal Structure of the coiled-coil, RA and PH domains of Lamellipodin date 2012-08-16
authors Chang, Y.C.E., Wu, J.
compound source
symmetry
R_factor
R_Free 0.28254
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.40
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceCrystal structure of Lamellipodin implicates diverse functions in actin polymerization and Ras signaling., Chang YC, Zhang H, Brennan ML, Wu J, Protein Cell. 2013 Mar;4(3):211-9. doi: 10.1007/s13238-013-2082-5. Epub 2013 Mar , 13. PMID:23483482
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (187 Kb) [Save to disk]
  • Biological Unit Coordinates (4gmv.pdb1.gz) 92 Kb
  • Biological Unit Coordinates (4gmv.pdb2.gz) 92 Kb
  • CSU: Contacts of Structural Units for 4GMV
  • Structure Factors (393 Kb)
  • Retrieve 4GMV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4GMV from S2C, [Save to disk]
  • Re-refined 4gmv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4GMV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4GMV
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4GMV, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4gmv_A] [4gmv] [4gmv_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4GMV: [PH] [RA ] by SMART
  • Other resources with information on 4GMV
  • Community annotation for 4GMV at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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