4GYI		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	ADP, EDO, MG, PHD	enzyme
Gene	CTHT
Gene Ontology	Chain Function Process Component A
Primary reference	ATPase-dependent role of the atypical kinase Rio2 on the evolving pre-40S ribosomal subunit., Ferreira-Cerca S, Sagar V, Schafer T, Diop M, Wesseling AM, Lu H, Chai E, Hurt E, Laronde-Leblanc N, Nat Struct Mol Biol. 2012 Dec;19(12):1316-23. doi: 10.1038/nsmb.2403. Epub 2012, Oct 28. PMID:23104056

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (122 Kb) [Save to disk] Biological Unit Coordinates (4gyi.pdb1.gz) 116 Kb LPC: Ligand-Protein Contacts for 4GYI CSU: Contacts of Structural Units for 4GYI Structure Factors (111 Kb) Retrieve 4GYI in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4GYI from S2C, [Save to disk] Re-refined 4gyi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4GYI in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4gyi] [4gyi_A] SWISS-PROT database: Domain found in 4GYI: [RIO ] by SMART

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