4J0F Crystal structure of 3-hydroxyacyl-CoA dehydrogenase from Caenorhadbitis elegans in P212121 space group date 2013-01-30
authors Xu, Y., Sun, F., Zhai, Y.
compound source
symmetry
R_factor
R_Free 0.24574
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.20
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referencePurification, crystallization and preliminary crystallographic analysis of 3-hydroxyacyl-CoA dehydrogenase from Caenorhabditis elegans., Xu Y, Sun F, Acta Crystallogr Sect F Struct Biol Cryst Commun. 2013 May 1;69(Pt 5):515-9. doi:, 10.1107/S1744309113007045. Epub 2013 Apr 30. PMID:23695566
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (95 Kb) [Save to disk]
  • Biological Unit Coordinates (4j0f.pdb1.gz) 90 Kb
  • CSU: Contacts of Structural Units for 4J0F
  • Structure Factors (503 Kb)
  • Retrieve 4J0F in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4J0F from S2C, [Save to disk]
  • Re-refined 4j0f structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4J0F in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4J0F
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4J0F, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4j0f] [4j0f_A] [4j0f_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4J0F
  • Community annotation for 4J0F at PDBWiki (http://pdbwiki.org)

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