4J4A Crystal Structure of Engineered Trimeric Cortexillin-1 Coiled-Coil Variant date 2013-02-06
authors Bjelic, S., Steinmetz, M.O., Kammerer, R.A.
compound source
symmetry
R_factor
R_Free 0.2578
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.65
ligand PO4 enzyme
Gene DDB
Primary referenceStructural basis for the oligomerization-state switch from a dimer to a trimer of an engineered cortexillin-1 coiled-coil variant., Bjelic S, Wieser M, Frey D, Stirnimann CU, Chance MR, Jaussi R, Steinmetz MO, Kammerer RA, PLoS One. 2013 May 14;8(5):e63370. doi: 10.1371/journal.pone.0063370. Print 2013. PMID:23691037
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (115 Kb) [Save to disk]
  • Biological Unit Coordinates (4j4a.pdb1.gz) 28 Kb
  • Biological Unit Coordinates (4j4a.pdb2.gz) 27 Kb
  • Biological Unit Coordinates (4j4a.pdb3.gz) 25 Kb
  • Biological Unit Coordinates (4j4a.pdb4.gz) 26 Kb
  • LPC: Ligand-Protein Contacts for 4J4A
  • CSU: Contacts of Structural Units for 4J4A
  • Structure Factors (324 Kb)
  • Retrieve 4J4A in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4J4A from S2C, [Save to disk]
  • Re-refined 4j4a structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4J4A in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4J4A
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4J4A, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4j4a_H] [4j4a_D] [4j4a_L] [4j4a_F] [4j4a_E] [4j4a_A] [4j4a_J] [4j4a_K] [4j4a_C] [4j4a_B] [4j4a] [4j4a_I] [4j4a_G]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4J4A
  • Community annotation for 4J4A at PDBWiki (http://pdbwiki.org)

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