4JBM Structure of murine DNA binding protein bound with ds DNA date 2013-02-19
authors Ru, H., Ni, X., Crowley, C., Zhao, L., Ding, W., Hung, L.W., Shaw, N., Cheng, G., Liu, Z.J.
compound source
symmetry
R_factor
R_Free 0.2827
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.22
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructural basis for termination of AIM2-mediated signaling by p202., Ru H, Ni X, Zhao L, Crowley C, Ding W, Hung LW, Shaw N, Cheng G, Liu ZJ, Cell Res. 2013 Jun;23(6):855-8. doi: 10.1038/cr.2013.52. Epub 2013 Apr 9. PMID:23567559
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (155 Kb) [Save to disk]
  • Biological Unit Coordinates (4jbm.pdb1.gz) 88 Kb
  • Biological Unit Coordinates (4jbm.pdb2.gz) 64 Kb
  • CSU: Contacts of Structural Units for 4JBM
  • Structure Factors (489 Kb)
  • Retrieve 4JBM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4JBM from S2C, [Save to disk]
  • Re-refined 4jbm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4JBM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4JBM
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4JBM, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4jbm_R] [4jbm_A] [4jbm_B] [4jbm_T] [4jbm]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4JBM
  • Community annotation for 4JBM at PDBWiki (http://pdbwiki.org)

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