OCA Atlas for 4JIW

4JIW

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

CL, MG, ZN

enzyme

Gene
Ontology

Chain	Function	Process	Component
H, P, D, L

Primary reference

PAAR-repeat proteins sharpen and diversify the type VI secretion system spike., Shneider MM, Buth SA, Ho BT, Basler M, Mekalanos JJ, Leiman PG, Nature. 2013 Aug 15;500(7462):350-3. doi: 10.1038/nature12453. Epub 2013 Aug 7. PMID:23925114

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (496 Kb) [Save to disk]

Biological Unit Coordinates (4jiw.pdb1.gz) 122 Kb

Biological Unit Coordinates (4jiw.pdb2.gz) 122 Kb

Biological Unit Coordinates (4jiw.pdb3.gz) 122 Kb

Biological Unit Coordinates (4jiw.pdb4.gz) 122 Kb

LPC: Ligand-Protein Contacts for 4JIW

CSU: Contacts of Structural Units for 4JIW

Structure Factors (486 Kb)

Retrieve 4JIW in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 4JIW from S2C, [Save to disk]

Re-refined 4jiw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4JIW in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4jiw_K] [4jiw] [4jiw_A] [4jiw_B] [4jiw_C] [4jiw_D] [4jiw_E] [4jiw_H] [4jiw_F] [4jiw_I] [4jiw_G] [4jiw_J] [4jiw_L] [4jiw_M] [4jiw_N] [4jiw_O] [4jiw_P]

SWISS-PROT database:

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