4JU5 Crystal structure of the dimeric form of the bb' domains of human protein disulfide isomerase date
authors Bastos-Aristizabal, S., Kozlov, G., Gehring, K.
compound source
symmetry
R_factor
R_Free 0.28982
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.28
Primary referenceStructural insight into the dimerization of human protein disulfide isomerase., Bastos-Aristizabal S, Kozlov G, Gehring K, Protein Sci. 2014 Feb 18. doi: 10.1002/pro.2444. PMID:24549644
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (67 Kb) [Save to disk]
  • Biological Unit Coordinates (4ju5.pdb1.gz) 62 Kb
  • CSU: Contacts of Structural Units for 4JU5
  • Structure Factors (239 Kb)
  • Retrieve 4JU5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4JU5 from S2C, [Save to disk]
  • Re-refined 4ju5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4JU5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4JU5
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 4JU5, from MSDmotif at EBI
  • Fold representative 4ju5 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ju5_A] [4ju5_B] [4ju5]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4JU5
  • Community annotation for 4JU5 at PDBWiki (http://pdbwiki.org)

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