4KXZ crystal structure of tgfb2 in complex with GC2008. date
authors Mathieu, M., Moulin, A.G., Wei, R.
compound source
symmetry
R_factor
R_Free 0.2220
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.83
ligand MES, PE5 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, E, B


Primary referenceStructures of a pan-specific antagonist antibody complexed to different isoforms of TGFbeta reveal structural plasticity of antibody-antigen interactions., Moulin A, Mathieu M, Lawrence C, Bigelow R, Levine M, Hamel C, Marquette JP, Le Parc J, Loux C, Ferrari P, Capdevila C, Dumas J, Dumas B, Rak A, Bird J, Qiu H, Pan CQ, Edmunds T, Wei RR, Protein Sci. 2014 Sep 10. doi: 10.1002/pro.2548. PMID:25209176
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (352 Kb) [Save to disk]
  • Biological Unit Coordinates (4kxz.pdb1.gz) 176 Kb
  • Biological Unit Coordinates (4kxz.pdb2.gz) 177 Kb
  • LPC: Ligand-Protein Contacts for 4KXZ
  • CSU: Contacts of Structural Units for 4KXZ
  • Structure Factors (667 Kb)
  • Retrieve 4KXZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4KXZ from S2C, [Save to disk]
  • Re-refined 4kxz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4KXZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4KXZ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4KXZ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4kxz_L] [4kxz_B] [4kxz_D] [4kxz] [4kxz_M] [4kxz_P] [4kxz_E] [4kxz_I] [4kxz_N] [4kxz_A] [4kxz_Q] [4kxz_H] [4kxz_J]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4KXZ: [IG_like] [IGv] [TGFB ] by SMART
  • Other resources with information on 4KXZ
  • Community annotation for 4KXZ at PDBWiki (http://pdbwiki.org)

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