4MF0	ITK kinase domain in complex with benzothiazole inhibitor compound 12a (1S,2S)-2-{4-[(DIMETHYLAMINO)METHYL]PHENYL}-N-[6-(PYRIDIN-3-YL)-1,3-BENZOTHIAZOL-2-YL]CYCLOPROPANECARBOXAMIDE (12a)	date	2013-08-27
authors	Eigenbrot, C., Shia, S.
compound		source
symmetry		R_factor R_Free 0.2677
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	2.67
ligand	29Z	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structure-based design and synthesis of potent benzothiazole inhibitors of interleukin-2 inducible T cell kinase (ITK)., Mackinnon CH, Lau K, Burch JD, Chen Y, Dines J, Ding X, Eigenbrot C, Heifetz A, Jaochico A, Johnson A, Kraemer J, Kruger S, Krulle TM, Liimatta M, Ly J, Maghames R, Montalbetti CA, Ortwine DF, Perez-Fuertes Y, Shia S, Stein DB, Trani G, Vaidya DG, Wang X, Bromidge SM, Wu LC, Pei Z, Bioorg Med Chem Lett. 2013 Dec 1;23(23):6331-5. doi: 10.1016/j.bmcl.2013.09.069. , Epub 2013 Oct 1. PMID:24138940

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (84 Kb) [Save to disk] Biological Unit Coordinates (4mf0.pdb1.gz) 79 Kb LPC: Ligand-Protein Contacts for 4MF0 CSU: Contacts of Structural Units for 4MF0 Structure Factors (298 Kb) Retrieve 4MF0 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4MF0 from S2C, [Save to disk] Re-refined 4mf0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4MF0 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4MF0

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4MF0, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4mf0] [4mf0_A] [4mf0_B] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 4MF0: [TyrKc ] by SMART

Other resources with information on 4MF0

Community annotation for 4MF0 at PDBWiki (http://pdbwiki.org)

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---