4MVD Crystal Structure of a Mammalian Cytidylyltransferase date 2013-09-23
authors Lee, J., Cornell, R.B.
compound source
symmetry
R_factor
R_Free 0.40659
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 8.00
ligand CDC enzyme
Gene
Ontology
ChainFunctionProcessComponent
F, A, E, B, H, C, D, G


Primary referenceStructural Basis for Autoinhibition of CTP:Phosphocholine Cytidylyltransferase (CCT), the Regulatory Enzyme in Phosphatidylcholine Synthesis, by Its Membrane-binding Amphipathic Helix., Lee J, Taneva SG, Holland BW, Tieleman DP, Cornell RB, J Biol Chem. 2014 Jan 17;289(3):1742-55. doi: 10.1074/jbc.M113.526970. Epub 2013 , Nov 25. PMID:24275660
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (218 Kb) [Save to disk]
  • Biological Unit Coordinates (4mvd.pdb1.gz) 103 Kb
  • Biological Unit Coordinates (4mvd.pdb2.gz) 102 Kb
  • LPC: Ligand-Protein Contacts for 4MVD
  • CSU: Contacts of Structural Units for 4MVD
  • Structure Factors (419 Kb)
  • Retrieve 4MVD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4MVD from S2C, [Save to disk]
  • Re-refined 4mvd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4MVD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4MVD
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4MVD, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4mvd_H] [4mvd_G] [4mvd_A] [4mvd_E] [4mvd_F] [4mvd_B] [4mvd_C] [4mvd] [4mvd_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4MVD
  • Community annotation for 4MVD at PDBWiki (http://pdbwiki.org)

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