4PBP		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	CA, GOL	enzyme
Gene Ontology	Chain Function Process Component C, A, B
Primary reference	Crystal structures for short-chain pentraxin from zebrafish demonstrate a cyclic trimer with new recognition and effector faces., Chen R, Qi J, Yuan H, Wu Y, Hu W, Xia C, J Struct Biol. 2015 Mar;189(3):259-68. doi: 10.1016/j.jsb.2015.01.001. Epub 2015 , Jan 13. PMID:25592778

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (237 Kb) [Save to disk] Biological Unit Coordinates (4pbp.pdb1.gz) 230 Kb LPC: Ligand-Protein Contacts for 4PBP CSU: Contacts of Structural Units for 4PBP Structure Factors (1543 Kb) Retrieve 4PBP in mmCIF format [Save to disk] Re-refined 4pbp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4PBP in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4pbp] [4pbp_A] [4pbp_B] [4pbp_C] SWISS-PROT database: Domain found in 4PBP: [PTX ] by SMART

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