4PWZ Crystal structure of TolB protein from Yersinia pestis CO92 date 2014-03-21
authors Maltseva, N., Kim, Y., Osipiuk, J., Anderson, W.F., Joachimiak, A., CSGID, Center.for.Structural.Genomics.of.Infectious.Diseases.
compound source
symmetry
R_factor
R_Free 0.198
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.73
ligand GOL, MES, MSE, PEG, SO4 enzyme
Gene YP
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (281 Kb) [Save to disk]
  • Biological Unit Coordinates (4pwz.pdb1.gz) 139 Kb
  • Biological Unit Coordinates (4pwz.pdb2.gz) 139 Kb
  • LPC: Ligand-Protein Contacts for 4PWZ
  • CSU: Contacts of Structural Units for 4PWZ
  • Structure Factors (932 Kb)
  • Retrieve 4PWZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4PWZ from S2C, [Save to disk]
  • Re-refined 4pwz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4PWZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4PWZ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4PWZ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4pwz_A] [4pwz] [4pwz_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4PWZ
  • Community annotation for 4PWZ at PDBWiki (http://pdbwiki.org)

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