4UF0	Crystal structure of JmjC domain of human histone demethylase UTY in complex with epitherapuetic compound 2-(((2-((2-(dimethylamino)ethyl) (ethyl)amino)-2-oxoethyl)amino)methyl)isonicotinic acid.	date
authors	Srikannathasan, V., Johansson, C., Gileadi, C., Tobias, K., Kopec, J., Delft, F.von., Arrowsmith, C.H., Bountra, C., Edwards, A., Oppermann, U.
compound		source
symmetry		R_factor R_Free 0.21517
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	1.78
ligand	EDO, FE2, MMK, ZN	enzyme
Gene Ontology	Chain Function Process Component B
Primary reference	Structural analysis of human KDM5B guides histone demethylase inhibitor development., Johansson C, Velupillai S, Tumber A, Szykowska A, Hookway ES, Nowak RP, Strain-Damerell C, Gileadi C, Philpott M, Burgess-Brown N, Wu N, Kopec J, Nuzzi A, Steuber H, Egner U, Badock V, Munro S, LaThangue NB, Westaway S, Brown J, Athanasou N, Prinjha R, Brennan PE, Oppermann U, Nat Chem Biol. 2016 May 23. doi: 10.1038/nchembio.2087. PMID:27214403

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (321 Kb) [Save to disk] Biological Unit Coordinates (4uf0.pdb1.gz) 158 Kb Biological Unit Coordinates (4uf0.pdb2.gz) 160 Kb LPC: Ligand-Protein Contacts for 4UF0 CSU: Contacts of Structural Units for 4UF0 Structure Factors (2157 Kb) Retrieve 4UF0 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4UF0 from S2C, [Save to disk] Re-refined 4uf0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4UF0 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4UF0

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4UF0, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4uf0_A] [4uf0_B] [4uf0] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 4UF0: [JmjC ] by SMART

Other resources with information on 4UF0

Community annotation for 4UF0 at PDBWiki (http://pdbwiki.org)

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