4UXD date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand EDO, GOL, IPA, PEG, PGE enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, C, D, A


Primary referenceInsights into the Substrate Specificity of Archaeal Entner-Doudoroff Aldolases: The Structures of Picrophilus torridus 2-Keto-3-deoxygluconate Aldolase and Sulfolobus solfataricus 2-Keto-3-deoxy-6-phosphogluconate Aldolase in Complex with 2-Keto-3-deoxy-6-phosphogluconate., Zaitsev V, Johnsen U, Reher M, Ortjohann M, Taylor GL, Danson MJ, Schonheit P, Crennell SJ, Biochemistry. 2018 Jun 13. doi: 10.1021/acs.biochem.8b00535. PMID:29812914
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (192 Kb) [Save to disk]
  • Biological Unit Coordinates (4uxd.pdb1.gz) 185 Kb
  • LPC: Ligand-Protein Contacts for 4UXD
  • CSU: Contacts of Structural Units for 4UXD
  • Structure Factors (643 Kb)
  • Retrieve 4UXD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4UXD from S2C, [Save to disk]
  • Re-refined 4uxd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4UXD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4uxd_C] [4uxd] [4uxd_A] [4uxd_B] [4uxd_D]
  • SWISS-PROT database:
  • Domain found in 4UXD: [DHDPS ] by SMART

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