4WYK Structure of the LRR and NTF2-like domains of NXF1 complexed with NXT1 date
authors Aibara, S., Valkov, E., Stewart, M.
compound source
symmetry
R_factor
R_Free 0.2656
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.40
Gene
Ontology
ChainFunctionProcessComponent
A, C


D, B


Primary referenceThe principal mRNA nuclear export factor NXF1:NXT1 forms a symmetric binding platform that facilitates export of retroviral CTE-RNA., Aibara S, Katahira J, Valkov E, Stewart M, Nucleic Acids Res. 2015 Jan 27. pii: gkv032. PMID:25628361
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (309 Kb) [Save to disk]
  • Biological Unit Coordinates (4wyk.pdb1.gz) 303 Kb
  • CSU: Contacts of Structural Units for 4WYK
  • Structure Factors (1076 Kb)
  • Retrieve 4WYK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4WYK from S2C, [Save to disk]
  • Re-refined 4wyk structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4WYK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4WYK
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4WYK, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4wyk_B] [4wyk_C] [4wyk] [4wyk_D] [4wyk_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4WYK: [LRRcap ] by SMART
    • Other resources with information on 4WYK
  • Community annotation for 4WYK at PDBWiki (http://pdbwiki.org)

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