4X6Y	Human soluble epoxide hydrolase in complex with a cyclopropyl urea derivative	date
authors	Chiyo, N., Takai, K., Ishii, T.
compound		source
symmetry		R_factor R_Free 0.2442
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	2.10
ligand	S94	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	Three-dimensional rational approach to the discovery of potent substituted cyclopropyl urea soluble epoxide hydrolase inhibitors., Takai K, Chiyo N, Nakajima T, Nariai T, Ishikawa C, Nakatani S, Ikeno A, Yamamoto S, Sone T, Bioorg Med Chem Lett. 2015 Apr 15;25(8):1705-8. doi: 10.1016/j.bmcl.2015.02.076. , Epub 2015 Mar 7. PMID:25800114

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (215 Kb) [Save to disk] Biological Unit Coordinates (4x6y.pdb1.gz) 209 Kb LPC: Ligand-Protein Contacts for 4X6Y CSU: Contacts of Structural Units for 4X6Y Structure Factors (756 Kb) Retrieve 4X6Y in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4X6Y from S2C, [Save to disk] Re-refined 4x6y structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4X6Y in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4X6Y

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4X6Y, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4x6y] [4x6y_A] [4x6y_B] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 4X6Y

Community annotation for 4X6Y at PDBWiki (http://pdbwiki.org)

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