4X96 Low resolution crystal structure of Lecithin:Cholesterol Acyltransferase (LCAT; residues 21-397) date
authors Glukhova, A., Tesmer, J.J.G.
compound source
symmetry
R_factor
R_Free 0.2286
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 8.69
ligand BMA, NAG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceStructure and function of lysosomal phospholipase A2 and lecithin:cholesterol acyltransferase., Glukhova A, Hinkovska-Galcheva V, Kelly R, Abe A, Shayman JA, Tesmer JJ, Nat Commun. 2015 Mar 2;6:6250. doi: 10.1038/ncomms7250. PMID:25727495
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (548 Kb) [Save to disk]
  • Biological Unit Coordinates (4x96.pdb1.gz) 138 Kb
  • Biological Unit Coordinates (4x96.pdb2.gz) 138 Kb
  • Biological Unit Coordinates (4x96.pdb3.gz) 138 Kb
  • Biological Unit Coordinates (4x96.pdb4.gz) 139 Kb
  • LPC: Ligand-Protein Contacts for 4X96
  • CSU: Contacts of Structural Units for 4X96
  • Structure Factors (147 Kb)
  • Retrieve 4X96 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4X96 from S2C, [Save to disk]
  • Re-refined 4x96 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4X96 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4X96
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4X96, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4x96_C] [4x96_D] [4x96_B] [4x96] [4x96_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4X96
  • Community annotation for 4X96 at PDBWiki (http://pdbwiki.org)

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