4Y1W Vis toxin, an ADP-ribosyltransferase from Vibrio Splendidus date
authors Ravulapalli, R., Tempel, W., Merrrill, A.R.
compound source
symmetry
R_factor
R_Free 0.1848
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.40
Gene
Ontology
ChainFunctionProcessComponent
A
  • toxin activity


  • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (116 Kb) [Save to disk]
  • Biological Unit Coordinates (4y1w.pdb1.gz) 112 Kb
  • CSU: Contacts of Structural Units for 4Y1W
  • Structure Factors (802 Kb)
  • Retrieve 4Y1W in mmCIF format [Save to disk]
  • Re-refined 4y1w structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4Y1W in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4Y1W
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4y1w_A] [4y1w]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4Y1W
  • Community annotation for 4Y1W at PDBWiki (http://pdbwiki.org)

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