4YFU		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	2DT, CME, FRU, GLC, SO4, TTP	enzyme
Gene Ontology	Chain Function Process Component D, A DNA-directed DNA polymerase ... 3'-5' exonuclease activity
Primary reference	The Closing Mechanism of DNA Polymerase I at Atomic Resolution., Miller BR 3rd, Beese LS, Parish CA, Wu EY, Structure. 2015 Jul 21. pii: S0969-2126(15)00269-5. doi:, 10.1016/j.str.2015.06.016. PMID:26211612

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (240 Kb) [Save to disk] Biological Unit Coordinates (4yfu.pdb1.gz) 117 Kb Biological Unit Coordinates (4yfu.pdb2.gz) 119 Kb LPC: Ligand-Protein Contacts for 4YFU CSU: Contacts of Structural Units for 4YFU Structure Factors (4372 Kb) Retrieve 4YFU in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4YFU from S2C, [Save to disk] Re-refined 4yfu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4YFU in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4yfu] [4yfu_A] [4yfu_B] [4yfu_C] [4yfu_D] [4yfu_E] [4yfu_F] SWISS-PROT database: Domains found in 4YFU: [35EXOc] [POLAc ] by SMART

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