4YV5 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 1PE, PE4, SO4, SVR enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A
  • toxin activity


    • Primary referenceStructural and functional evidence for membrane docking and disruption sites on phospholipase A2-like proteins revealed by complexation with the inhibitor suramin., Salvador GH, Dreyer TR, Cavalcante WL, Matioli FF, Dos Santos JI, Velazquez-Campoy A, Gallacci M, Fontes MR, Acta Crystallogr D Biol Crystallogr. 2015 Oct;71(Pt 10):2066-78. doi:, 10.1107/S1399004715014443. Epub 2015 Sep 26. PMID:26457430
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (95 Kb) [Save to disk]
  • Biological Unit Coordinates (4yv5.pdb1.gz) 87 Kb
  • LPC: Ligand-Protein Contacts for 4YV5
  • CSU: Contacts of Structural Units for 4YV5
  • Structure Factors (358 Kb)
  • Retrieve 4YV5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4YV5 from S2C, [Save to disk]
  • Re-refined 4yv5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4YV5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4yv5] [4yv5_A] [4yv5_B]
  • SWISS-PROT database:
  • Domain found in 4YV5: [PA2c ] by SMART

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