4YV9 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ABA, BMT, DAL, MLE, MSE, MVA, SAR, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, D, C, A


Primary referenceRgg protein structure-function and inhibition by cyclic peptide compounds., Parashar V, Aggarwal C, Federle MJ, Neiditch MB, Proc Natl Acad Sci U S A. 2015 Apr 6. pii: 201500357. PMID:25847993
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (409 Kb) [Save to disk]
  • Biological Unit Coordinates (4yv9.pdb1.gz) 200 Kb
  • Biological Unit Coordinates (4yv9.pdb2.gz) 200 Kb
  • LPC: Ligand-Protein Contacts for 4YV9
  • CSU: Contacts of Structural Units for 4YV9
  • Structure Factors (949 Kb)
  • Retrieve 4YV9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4YV9 from S2C, [Save to disk]
  • Re-refined 4yv9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4YV9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4yv9] [4yv9_A] [4yv9_B] [4yv9_C] [4yv9_D] [4yv9_E] [4yv9_F] [4yv9_G] [4yv9_H]
  • SWISS-PROT database:
  • Domain found in 4YV9: [HTH_XRE ] by SMART

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