4YVM date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Primary referenceCrystal structure of CagL from Helicobacter pylori K74 strain., Choi JM, Choi YH, Sudhanva MS, Devakumar S, Lee KH, Cha JH, Lee SH, Biochem Biophys Res Commun. 2015 May 15;460(4):964-70. doi:, 10.1016/j.bbrc.2015.03.135. Epub 2015 Apr 1. PMID:25839651
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (70 Kb) [Save to disk]
  • Biological Unit Coordinates (4yvm.pdb1.gz) 34 Kb
  • Biological Unit Coordinates (4yvm.pdb2.gz) 34 Kb
  • CSU: Contacts of Structural Units for 4YVM
  • Structure Factors (306 Kb)
  • Retrieve 4YVM in mmCIF format [Save to disk]
  • Re-refined 4yvm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4YVM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4yvm] [4yvm_A] [4yvm_B]
  • SWISS-PROT database:

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