4IXU	Crystal structure of human Arginase-2 complexed with inhibitor 11d: {(5R)-5-amino-5-carboxy-5-[(3-endo)-8-(3,4-dichlorobenzyl)-8-azabicyclo[3.2.1]oct-3-yl]pentyl}(trihydroxy)borate(1-)	date	2013-01-28
authors	Cousido-Siah, A., Mitschler, A., Ruiz, F.X., Whitehouse, D., Beckett, P., Zandt, M.C.Van., Ji, M.K., Ryder, T., Jagdmann, R., Andreoli, M., Olczak, J., Mazur, M., Czestkowski, W., Piotrowska, W., Schroeter, H., Golebiowski, A., Podjarny, A.
compound		source
symmetry		R_factor R_Free 0.1932
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	1.90
ligand	38I, BEN, BME, MN	enzyme
Gene Ontology	Chain Function Process Component A, C, B
Primary reference	Synthesis of quaternary alpha-amino acid-based arginase inhibitors via the Ugi reaction., Golebiowski A, Whitehouse D, Beckett RP, Van Zandt M, Ji MK, Ryder TR, Jagdmann E, Andreoli M, Lee Y, Sheeler R, Conway B, Olczak J, Mazur M, Czestkowski W, Piotrowska W, Cousido-Siah A, Ruiz FX, Mitschler A, Podjarny A, Schroeter H, Bioorg Med Chem Lett. 2013 Sep 1;23(17):4837-41. doi: 10.1016/j.bmcl.2013.06.092., Epub 2013 Jul 8. PMID:23886684

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (169 Kb) [Save to disk] Biological Unit Coordinates (4ixu.pdb1.gz) 57 Kb Biological Unit Coordinates (4ixu.pdb2.gz) 57 Kb Biological Unit Coordinates (4ixu.pdb3.gz) 56 Kb LPC: Ligand-Protein Contacts for 4IXU CSU: Contacts of Structural Units for 4IXU Structure Factors (796 Kb) Retrieve 4IXU in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4IXU from S2C, [Save to disk] Re-refined 4ixu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4IXU in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4IXU

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4IXU, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4ixu_C] [4ixu] [4ixu_A] [4ixu_B] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 4IXU

Community annotation for 4IXU at PDBWiki (http://pdbwiki.org)

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