5A3F Crystal structure of the dynamin tetramer date
authors Reubold, T.F., Faelber, K., Plattner, N., Posor, Y., Branz, K., Curth, U., Schlegel, J., Anand, R., Manstein, D.J., Noe, F., Haucke, V., Daumke, O., Eschenburg, S.
compound source
symmetry
R_factor
R_Free 0.2784
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.70
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceCrystal structure of the dynamin tetramer., Reubold TF, Faelber K, Plattner N, Posor Y, Ketel K, Curth U, Schlegel J, Anand R, Manstein DJ, Noe F, Haucke V, Daumke O, Eschenburg S, Nature. 2015 Aug 24. doi: 10.1038/nature14880. PMID:26302298
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (819 Kb) [Save to disk]
  • Biological Unit Coordinates (5a3f.pdb1.gz) 808 Kb
  • CSU: Contacts of Structural Units for 5A3F
  • Structure Factors (437 Kb)
  • Retrieve 5A3F in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5A3F from S2C, [Save to disk]
  • Re-refined 5a3f structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5A3F in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5A3F
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5a3f_D] [5a3f_C] [5a3f_A] [5a3f_B] [5a3f]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 5A3F: [DYNc] [GED] [PH ] by SMART
    • Other resources with information on 5A3F
  • Community annotation for 5A3F at PDBWiki (http://pdbwiki.org)

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