5AOA Hydrolase date Sep 10, 2015
title The Structure Of A Novel Thermophilic Esterase From The Plan Species, Thermogutta Terrifontis, Est2-Propionate Bound
authors C.Sayer, Z.Szabo, M.N.Isupov, C.Ingham, J.A.Littlechild
compound source
Molecule: Esterase
Chain: A
Ec: 3.1.1.1
Engineered: Yes
Organism_scientific: Thermogutta Terrifontis
Organism_taxid: 1331910
Strain: R1
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_vector: Plate31
symmetry Space Group: P 21 21 21
R_factor 0.168 R_Free 0.202
crystal
cell
length a length b length c angle alpha angle beta angle gamma
61.957 70.909 75.861 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.71 Å
ligand CL, EDO, PEG, PG4, PPI enzyme Hydrolase E.C.3.1.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe Structure of a Novel Thermophilic Esterase from the Planctomycetes Species, Thermogutta terrifontis Reveals an Open Active Site Due to a Minimal 'Cap' Domain., Sayer C, Szabo Z, Isupov MN, Ingham C, Littlechild JA, Front Microbiol. 2015 Nov 23;6:1294. doi: 10.3389/fmicb.2015.01294. eCollection, 2015. PMID:26635762
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (57 Kb) [Save to disk]
  • Biological Unit Coordinates (5aoa.pdb1.gz) 53 Kb
  • LPC: Ligand-Protein Contacts for 5AOA
  • CSU: Contacts of Structural Units for 5AOA
  • Structure Factors (1918 Kb)
  • Retrieve 5AOA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5AOA from S2C, [Save to disk]
  • Re-refined 5aoa structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5AOA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5AOA
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5aoa] [5aoa_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5AOA
  • Community annotation for 5AOA at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science