5B5E date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand BCR, BCT, CA, CL, CLA, DGD, DMS, FE2, FME, HEC, HEM, HTG, LHG, LMG, LMT, MG, OEX, PHO, PL9, RRX, SQD, UNL enzyme
Gene
Ontology
ChainFunctionProcessComponent
D, d


E, e


I, i


L, l


M, m


O, o
  • oxygen evolving activity


    • V, v


    a, A


    b, B


    c, C


    f, F


    h, H


    j, J


    k, K


    t, T


    u, U


    x, X


    y, Y


    z, Z


    Primary referenceTwo Different Structures of the Oxygen-Evolving Complex in the Same Polypeptide Frameworks of Photosystem II., Tanaka A, Fukushima Y, Kamiya N, J Am Chem Soc. 2017 Jan 30. doi: 10.1021/jacs.6b09666. PMID:28102667
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1159 Kb) [Save to disk]
  • Biological Unit Coordinates (5b5e.pdb1.gz) 1084 Kb
  • LPC: Ligand-Protein Contacts for 5B5E
  • CSU: Contacts of Structural Units for 5B5E
  • Structure Factors (13837 Kb)
  • Retrieve 5B5E in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5B5E from S2C, [Save to disk]
  • Re-refined 5b5e structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5B5E in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5b5e_a] [5b5e] [5b5e_A] [5b5e_X] [5b5e_B] [5b5e_Y] [5b5e_C] [5b5e_Z] [5b5e_D] [5b5e_E] [5b5e_F] [5b5e_H] [5b5e_I] [5b5e_J] [5b5e_K] [5b5e_L] [5b5e_M] [5b5e_O] [5b5e_T] [5b5e_U] [5b5e_V] [5b5e_b] [5b5e_c] [5b5e_d] [5b5e_e] [5b5e_f] [5b5e_h] [5b5e_i] [5b5e_j] [5b5e_k] [5b5e_l] [5b5e_m] [5b5e_o] [5b5e_t] [5b5e_u] [5b5e_v] [5b5e_x] [5b5e_y] [5b5e_z]
  • SWISS-PROT database:

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science