5BNV	Chaperone Dna Binding Protein	date	May 26, 2015
title	Crystal Structure Of Human Mcm2 Hbd Chaperoning A Histone H3 Tetramer
authors	H.Huang, D.J.Patel
compound		source
Molecule: Histone H3.3 Chain: A, D Fragment: Unp Residues 58-136 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: H3f3a, H3.3a, H3f3, Pp781, H3f3b, H3.3b Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Ril Expression_system_vector_type: Plasmid Expression_system_plasmid: Petduet
Molecule: Histone H4 Chain: B, E Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Hist1h4a, H4a, H4fa, Hist1h4b, H4i, H4fi, Hist1h4c, H4fg, Hist1h4d, H4b, H4fb, Hist1h4e, H4j, H4fj, Hist1h4f, H4fc, Hist1h4h, H4h, H4fh, Hist1h4i, H4m, H4fm, Hist1h4j, H4fe, Hist1h4k, H4d, H4fd, Hist1h4l, H4k, H4fk, Hist2h4a, H4f2, H4fn, Hist2h4, Hist2h4b, H4o, H4fo, Hist4h4; Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid Expression_system_plasmid: Petduet
Molecule: Dna Replication Licensing Factor Mcm2 Chain: F, C Fragment: Unp Residues 61-130 Synonym: Minichromosome Maintenance Protein 2 Homolog, Nucl Protein Bm28; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Mcm2, Bm28, Ccnl1, Cdcl1, Kiaa0030 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid Expression_system_plasmid: Prsfduet
symmetry	Space Group: P 41 21 2	R_factor 0.196 R_Free 0.220
crystal cell	length a length b length c angle alpha angle beta angle gamma 110.592 110.592 203.265 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.80 Å
ligand	PO4	enzyme
Gene Ontology	Chain Function Process Component A, D E, B F, C
Primary reference	A unique binding mode enables MCM2 to chaperone histones H3-H4 at replication forks., Huang H, Stromme CB, Saredi G, Hodl M, Strandsby A, Gonzalez-Aguilera C, Chen S, Groth A, Patel DJ, Nat Struct Mol Biol. 2015 Jul 13. doi: 10.1038/nsmb.3055. PMID:26167883

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (149 Kb) [Save to disk] Biological Unit Coordinates (5bnv.pdb1.gz) 139 Kb LPC: Ligand-Protein Contacts for 5BNV CSU: Contacts of Structural Units for 5BNV Structure Factors (454 Kb) Retrieve 5BNV in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5BNV from S2C, [Save to disk] Re-refined 5bnv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5BNV in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5BNV

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 5BNV, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5bnv_E] [5bnv_D] [5bnv_C] [5bnv_B] [5bnv_F] [5bnv] [5bnv_A] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 5BNV: [H3] [H4 ] by SMART

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Community annotation for 5BNV at PDBWiki (http://pdbwiki.org)

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