5C2D		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	CA	enzyme
Primary reference	Two distinct modes of metal ion binding in the nuclease active site of a viral DNA-packaging terminase: insight into the two-metal-ion catalytic mechanism., Zhao H, Lin Z, Lynn AY, Varnado B, Beutler JA, Murelli RP, Le Grice SF, Tang L, Nucleic Acids Res. 2015 Oct 7. pii: gkv1018. PMID:26450964

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (88 Kb) [Save to disk] Biological Unit Coordinates (5c2d.pdb1.gz) 83 Kb LPC: Ligand-Protein Contacts for 5C2D CSU: Contacts of Structural Units for 5C2D Structure Factors (474 Kb) Retrieve 5C2D in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5C2D from S2C, [Save to disk] Re-refined 5c2d structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5C2D in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5c2d] [5c2d_A] SWISS-PROT database:

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