5CJB	Immune System Structural Protein	date	Jul 14, 2015
title	Human Osteoclast Associated Receptor (Oscar) In Complex With Collagen-Like Peptide
authors	G.F.Gao, J.Qi, Y.Shi, J.Haywood
compound		source
Molecule: Osteoclast-Associated Immunoglobulin-Like Recepto Chain: A Fragment: Unp Residues 31-215 Synonym: Hoscar,Polymeric Immunoglobulin Receptor 3, Poly-I 3; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Oscar Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Collagen-Like Peptide Chain: B, C, D Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 21 21 21	R_factor 0.222 R_Free 0.264
crystal cell	length a length b length c angle alpha angle beta angle gamma 45.940 48.424 118.055 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.40 Å
ligand	HYP	enzyme
Primary reference	Structural basis of collagen recognition by human osteoclast-associated receptor and design of osteoclastogenesis inhibitors., Haywood J, Qi J, Chen CC, Lu G, Liu Y, Yan J, Shi Y, Gao GF, Proc Natl Acad Sci U S A. 2016 Jan 7. pii: 201522572. PMID:26744311

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (81 Kb) [Save to disk] Biological Unit Coordinates (5cjb.pdb1.gz) 76 Kb LPC: Ligand-Protein Contacts for 5CJB CSU: Contacts of Structural Units for 5CJB Structure Factors (162 Kb) Retrieve 5CJB in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5CJB from S2C, [Save to disk] Re-refined 5cjb structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5CJB in 3D

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Visual 3D analysis of 5CJB

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5cjb_C] [5cjb_A] [5cjb_D] [5cjb] [5cjb_B] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 5CJB: [IG] [IG_like ] by SMART

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