5CNM Signaling Protein date Jul 17, 2015
title Mglur3 Complexed With Glutamate Analog
authors J.A.Monn, D.K.Clawson, D.Mckinzie
compound source
Molecule: Metabotropic Glutamate Receptor 3
Chain: A
Fragment: Unp Residues 2-507
Synonym: Mglur3
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Grm3, Gprc1c, Mglur3
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
Expression_system_vector_type: Baculovirus
symmetry Space Group: P 21 21 2
R_factor 0.168 R_Free 0.226
crystal
cell
length a length b length c angle alpha angle beta angle gamma
84.892 99.025 71.172 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.84 Å
ligand 52Q, CL, MG, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSynthesis and Pharmacological Characterization of C4-(Thiotriazolyl)-Substituted-2-Aminobicyclo[3.1.0]hexane-2,6-Dicarboxylates. Identification of (1R,2S,4R,5R,6R)-2-Amino-4-(1H-1,2,4-triazol-3-ylsulfanyl)bicyclo[3.1.0]hexane-2, 6-dicarboxylic acid (LY2812223), a Highly Potent, Functionally Selective mGlu2 Receptor Agonist., Monn JA, Prieto L, Taboada L, Hao J, Reinhard MR, Henry SS, Beadle CD, Walton L, Man T, Rudyk H, Clark B, Tupper D, Baker SR, Lamas C, Montero C, Marcos A, Blanco J, Bures M, Clawson DK, Atwell S, Lu F, Wang J, Russell M, Heinz BA, Wang X, Carter JH, Getman BG, Catlow JT, Swanson S, Johnson BG, Shaw DB, McKinzie DL, J Med Chem. 2015 Aug 27. PMID:26313429
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (78 Kb) [Save to disk]
  • Biological Unit Coordinates (5cnm.pdb1.gz) 142 Kb
  • Biological Unit Coordinates (5cnm.pdb2.gz) 72 Kb
  • LPC: Ligand-Protein Contacts for 5CNM
  • CSU: Contacts of Structural Units for 5CNM
  • Structure Factors (818 Kb)
  • Retrieve 5CNM in mmCIF format [Save to disk]
  • Re-refined 5cnm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5CNM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5CNM
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5cnm] [5cnm_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5CNM
  • Community annotation for 5CNM at PDBWiki (http://pdbwiki.org)

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