5DHE date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand GOL enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceCrystal structures of chitin binding domains of chitinase from Thermococcus kodakarensis KOD1., Hanazono Y, Takeda K, Niwa S, Hibi M, Takahashi N, Kanai T, Atomi H, Miki K, FEBS Lett. 2016 Jan;590(2):298-304. doi: 10.1002/1873-3468.12055. Epub 2016 Jan, 20. PMID:26823175
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (42 Kb) [Save to disk]
  • Biological Unit Coordinates (5dhe.pdb1.gz) 19 Kb
  • Biological Unit Coordinates (5dhe.pdb2.gz) 19 Kb
  • LPC: Ligand-Protein Contacts for 5DHE
  • CSU: Contacts of Structural Units for 5DHE
  • Structure Factors (196 Kb)
  • Retrieve 5DHE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5DHE from S2C, [Save to disk]
  • Re-refined 5dhe structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5DHE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5dhe] [5dhe_A] [5dhe_B]
  • SWISS-PROT database:
  • Domain found in 5DHE: [CBD_II ] by SMART

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