5DM0 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 5D8, SAH, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A


Primary referenceInsights into methyltransferase specificity and bioactivity of derivatives of the antibiotic plantazolicin., Hao Y, Blair PM, Sharma A, Mitchell DA, Nair SK, ACS Chem Biol. 2015 May 15;10(5):1209-1216. doi: 10.1021/cb501042a. Epub 2015 Feb, 11. PMID:25635336
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (103 Kb) [Save to disk]
  • Biological Unit Coordinates (5dm0.pdb1.gz) 49 Kb
  • Biological Unit Coordinates (5dm0.pdb2.gz) 51 Kb
  • LPC: Ligand-Protein Contacts for 5DM0
  • CSU: Contacts of Structural Units for 5DM0
  • Structure Factors (857 Kb)
  • Retrieve 5DM0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5DM0 from S2C, [Save to disk]
  • Re-refined 5dm0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5DM0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5dm0] [5dm0_A] [5dm0_B]
  • SWISS-PROT database:

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